| ROUND | Q1 | Q2 | Q3 | Q4 | R1 | R2 | R3 | QF | SF | F | |||||||||||||
| l1 | l2 | l1 | l2 | l1 | l2 | l1 | l2 | r1 | r2 | r3 | r4 | r5 | r6 | l1 | l2 | l1 | l2 | l1 | l2 | l1 | l2 | ||
| Season archive |
| Tuesday, 3 July 2012 | ||||||
| q1l1 |  Shkëndija | 0-0 | Portadown | |||
| q1l1 |  Víkingur | 0-6 | Gomel | |||
| Thursday, 5 July 2012 | ||||||
| q1l1 |  FC Twente | 6-0 | UE Santa Coloma | |||
| q1l1 |  Lech Poznań | 2-0 | Zhetysu | |||
| q1l1 |  MTK | 1-1 | Senica | |||
| q1l1 |  Bohemians | 0-0 | Þór | |||
| q1l1 | FH | 2-1 | USV Eschen-Mauren | |||
| q1l1 |  Elfsborg | 8-0 | Floriana | |||
| q1l1 |  Tirana | 2-0 | CS Grevenmacher | |||
| q1l1 | St. Patrick's | 1-0 | ÍBV | |||
| q1l1 | Cliftonville | 1-0 | Kalmar FF | |||
| q1l1 |  Olimpija | 3-0 | Jeunesse Esch | |||
| q1l1 | Flamurtari | 0-1 | Budapest-Honvéd | |||
| q1l1 |  Torpedo Kutaisi | 1-1 | Aktobe | |||
| q1l1 |  Sarajevo | 5-2 | Hibernians | |||
| q1l1 | Birkirkara | 2-2 | Metalurg | |||
| q1l1 |  Pyunik | 0-3 | Zeta | |||
| q1l1 |  Fiorita | 0-2 | FK Liepāja | |||
| q1l1 |  Trans Narva | 0-5 | Şamaxı | |||
| q1l1 |  Bangor City | 0-0 | Zimbru | |||
| q1l1 | Cefn Druids | 0-0 | MyPa | |||
| q1l1 | Teuta | 0-3 | Rustavi | |||
| q1l1 | Borac Banja Luka | 2-2 | Celik | |||
| q1l1 | KuPS | 2-1 | Llanelli Town | |||
| q1l1 | Levadia Tallinn | 1-0 | Šiauliai* | |||
| q1l1 | Sūduva | 0-1 | FC Daugava | |||
| q1l1 | Rudar | 0-1 | Shirak | |||
| q1l1 | Xazar Lankaran | 2-2 | Nõmme Kalju | |||
| q1l1 | FC Santa Coloma | 0-1 | Osijek | |||
| q1l1 | Crusaders | 0-3 | Rosenborg | |||
| q1l1 | Dacia | 1-0 | Celje | |||
| q1l1 | Baki | 0-0 | Mura | |||
| q1l1 | Renova | 4-0 | Libertas | |||
| q1l1 | FC Differdange 03 | 3-0 | NSÍ | |||
| q1l1 | EB/Streymur | 3-1 | Gandzasar | |||
| q1l1 | JJK | 2-0 | Stabæk | |||
| q1l1 |  Jagodina | 0-1 | Ordabasy | |||
| Tuesday, 10 July 2012 | ||||||
| q1l2 | Portadown | 2-1 | Shkëndija | 2-1 | ||
| q1l2 | Floriana | 0-4 | Elfsborg | 0-12 | ||
| q1l2 | CS Grevenmacher | 0-0 | Tirana | 0-2 | ||
| q1l2 | Nõmme Kalju | 0-2 | Xazar Lankaran | 2-4 | ||
| Thursday, 12 July 2012 | ||||||
| q1l2 | Rosenborg | 1-0 | Crusaders | 4-0 | ||
| q1l2 | MyPa | 5-0 | Cefn Druids | 5-0 | ||
| q1l2 | Celje | 0-1 | Dacia | 0-2 | ||
| q1l2 | Budapest-Honvéd | 2-0 | Flamurtari | 3-0 | ||
| q1l2 | Jeunesse Esch | 0-3 | Olimpija | 0-6 | ||
| q1l2 | ÍBV | 2-1 | St. Patrick's | 2-2, aet | ||
| q1l2 | Osijek | 3-1 | FC Santa Coloma | 4-1 | ||
| q1l2 | Stabæk | 3-2 | JJK | 3-4 | ||
| q1l2 | Zimbru | 2-1 | Bangor City | 2-1 | ||
| q1l2 | Shirak | 1-1 | Rudar | 2-1 | ||
| q1l2 | FK Liepāja | 4-0 | Fiorita | 6-0 | ||
| q1l2 | Kalmar FF | 4-0 | Cliftonville | 4-1 | ||
| q1l2 | Gomel | 4-0 | Víkingur | 10-0 | ||
| q1l2 | Mura | 2-0 | Baki | 2-0 | ||
| q1l2 | USV Eschen-Mauren | 0-1 | FH | 1-3 | ||
| q1l2 | Hibernians | 4-4 | Sarajevo | 6-9 | ||
| q1l2 | FC Daugava | 2-3 | Sūduva | 3-3 | ||
| q1l2 | NSÍ | 0-3 | FC Differdange 03 | 0-6 | ||
| q1l2 | Šiauliai* | 2-1 | Levadia Tallinn | 2-2 | ||
| q1l2 | Llanelli Town | 1-1 | KuPS | 2-3 | ||
| q1l2 | Rustavi | 6-1 | Teuta | 9-1 | ||
| q1l2 | Senica | 2-1 | MTK | 3-2 | ||
| q1l2 | Zeta | 1-2 | Pyunik | 4-2 | ||
| q1l2 | Þór | 5-1 | Bohemians | 5-1 | ||
| q1l2 | Aktobe | 1-0 | Torpedo Kutaisi | 2-1 | ||
| q1l2 | Şamaxı | 2-0 | Trans Narva | 7-0 | ||
| q1l2 | Zhetysu | 1-1 | Lech Poznań | 1-3 | ||
| q1l2 | Libertas | 0-4 | Renova | 0-8 | ||
| q1l2 | Ordabasy | 0-0 | Jagodina | 1-0 | ||
| q1l2 | Gandzasar | 2-0 | EB/Streymur | 3-3 | ||
| q1l2 | Metalurg | 0-0 | Birkirkara | 2-2 | ||
| q1l2 | Celik | 1-1 | Borac Banja Luka | 3-3 | ||
| q1l2 | UE Santa Coloma | 0-3 | FC Twente | 0-9 | ||
