| ROUND | C | Q1 | Q2 | Q3 | Q4 | R1 | R2 | QF | SF | F | ||||||||||||
| l1 | l2 | l1 | l2 | l1 | l2 | l1 | l2 | r1 | r2 | r3 | r4 | r5 | r6 | l1 | l2 | l1 | l2 | l1 | l2 | |||
| Season archive |
| Tuesday, 26 July 2016 | ||||||
| q3l1 |  Ajax | 1-1 | PAOK | |||
| q3l1 |  Sparta Praha | 1-1 | FCSB | |||
| q3l1 |  Dinamo Zagreb | 2-0 | Dinamo Tbilisi | |||
| q3l1 | Viktoria Plzeň | 0-0 | Qarabag | |||
| q3l1 |  Shakhtar | 2-0 | Young Boys | |||
| q3l1 |  Rostov | 2-2 | Anderlecht | |||
| q3l1 |  Partizani | 0-1 | FC Salzburg | |||
| q3l1 |  BATE | 1-0 | Dundalk | |||
| q3l1 |  Ludogorets | 2-2 | Crvena Zvezda | |||
| Wednesday, 27 July 2016 | ||||||
| q3l1 |  Rosenborg | 2-1 | APOEL | |||
| q3l1 |  Fenerbahçe | 2-1 | Monaco | |||
| q3l1 | Olympiakos | 0-0 | Hapoel Beer Sheva | |||
| q3l1 |  AS Trenčín | 0-1 | Legia Warszawa | |||
| q3l1 | Astra Giurgiu | 1-1 | FC København | |||
| q3l1 |  Astana | 1-1 | Celtic | |||
| Tuesday, 2 August 2016 | ||||||
| q3l2 | Dundalk | 3-0 | BATE | 3-1 | ||
| q3l2 | Crvena Zvezda | 2-4 | Ludogorets | 4-6, aet | ||
| q3l2 | Dinamo Tbilisi | 0-1 | Dinamo Zagreb | 0-3 | ||
| q3l2 | APOEL | 3-0 | Rosenborg | 4-2 | ||
| q3l2 | Qarabag | 1-1 | Viktoria Plzeň | 1-1 | ||
| Wednesday, 3 August 2016 | ||||||
| q3l2 | Celtic | 2-1 | Astana | 3-2 | ||
| q3l2 | FCSB | 2-0 | Sparta Praha | 3-1 | ||
| q3l2 | Monaco | 3-1 | Fenerbahçe | 4-3 | ||
| q3l2 | Legia Warszawa | 0-0 | AS Trenčín | 1-0 | ||
| q3l2 | Young Boys | 2-0 | Shakhtar | 2-2, aet, p4-2 | ||
| q3l2 | FC Salzburg | 2-0 | Partizani | 3-0 | ||
| q3l2 | FC København | 3-0 | Astra Giurgiu | 4-1 | ||
| q3l2 | Anderlecht | 0-2 | Rostov | 2-4 | ||
| q3l2 | PAOK | 1-2 | Ajax | 2-3 | ||
| q3l2 | Hapoel Beer Sheva | 1-0 | Olympiakos | 1-0 | ||
