| ROUND | C | Q1 | Q2 | Q3 | Q4 | R1 | R2 | QF | SF | F | ||||||||||||
| l1 | l2 | l1 | l2 | l1 | l2 | l1 | l2 | r1 | r2 | r3 | r4 | r5 | r6 | l1 | l2 | l1 | l2 | l1 | l2 | |||
| Season archive |
| Tuesday, 28 June 2016 | ||||||
| q1l1 |  Flora | 2-1 | Lincoln Red Imps | |||
| q1l1 |  Valletta | 1-0 | B36 | |||
| q1l1 |  The New Saints | 2-1 | Tre Penne | |||
| q1l1 |  FC Santa Coloma | 0-0 | Alashkert | |||
| Tuesday, 5 July 2016 | ||||||
| q1l2 | B36 | 2-1 | Valletta | 2-2 | ||
| q1l2 | Tre Penne | 0-3 | The New Saints | 1-5 | ||
| q1l2 | Alashkert | 3-0 | FC Santa Coloma | 3-0 | ||
| Wednesday, 6 July 2016 | ||||||
| q1l2 | Lincoln Red Imps | 2-0 | Flora | 3-2 | ||
