| ROUND | C | Q1 | Q2 | Q3 | Q4 | R1 | R2 | QF | SF | F | ||||||||||||
| l1 | l2 | l1 | l2 | l1 | l2 | l1 | l2 | r1 | r2 | r3 | r4 | r5 | r6 | l1 | l2 | l1 | l2 | l1 | l2 | |||
| Season archive |
| Tuesday, 16 July 2013 | ||||||
| q2l1 |  FCSB | 3-0 | Vardar | |||
| q2l1 |  Dinamo Tbilisi | 6-1 | EB/Streymur | |||
| q2l1 |  Viktoria Plzeň | 4-3 | Željezničar | |||
| q2l1 |  Sheriff | 1-1 | Sutjeska | |||
| q2l1 |  BATE | 0-1 | Shakhter | |||
| q2l1 |  Ekranas | 0-1 | FH | |||
| q2l1 |  Birkirkara | 0-0 | Maribor | |||
| q2l1 |  Fola | 0-5 | Dinamo Zagreb | |||
| Wednesday, 17 July 2013 | ||||||
| q2l1 |  Slovan Bratislava | 2-1 | Ludogorets | |||
| q2l1 |  HJK | 0-0 | Nõmme Kalju | |||
| q2l1 |  Györi ETO | 0-2 | Maccabi Tel Aviv | |||
| q2l1 |  Elfsborg | 7-1 | FC Daugava | |||
| q2l1 |  Sligo Rovers | 0-1 | Molde | |||
| q2l1 |  Shirak | 1-1 | Partizan | |||
| q2l1 |  Cliftonville | 0-3 | Celtic | |||
| q2l1 |  Neftçi | 0-0 | Skënderbeu | |||
| q2l1 |  The New Saints | 1-3 | Legia Warszawa | |||
| Tuesday, 23 July 2013 | ||||||
| q2l2 | Celtic | 2-0 | Cliftonville | 5-0 | ||
| q2l2 | Molde | 2-0 | Sligo Rovers | 3-0 | ||
| q2l2 | Dinamo Zagreb | 1-0 | Fola | 6-0 | ||
| q2l2 | Vardar | 1-2 | FCSB | 1-5 | ||
| q2l2 | Maccabi Tel Aviv | 2-1 | Györi ETO | 4-1 | ||
| q2l2 | FH | 2-1 | Ekranas | 3-1 | ||
| q2l2 | Željezničar | 1-2 | Viktoria Plzeň | 4-6 | ||
| q2l2 | FC Daugava | 0-4 | Elfsborg | 1-11 | ||
| q2l2 | Sutjeska | 0-5 | Sheriff | 1-6 | ||
| q2l2 | Skënderbeu | 1-0 | Neftçi | 1-0, aet | ||
| q2l2 | Shakhter | 1-0 | BATE | 2-0 | ||
| q2l2 | EB/Streymur | 1-3 | Dinamo Tbilisi | 2-9 | ||
| q2l2 | Nõmme Kalju | 2-1 | HJK | 2-1 | ||
| Wednesday, 24 July 2013 | ||||||
| q2l2 | Legia Warszawa | 1-0 | The New Saints | 4-1 | ||
| q2l2 | Partizan | 0-0 | Shirak | 1-1 | ||
| q2l2 | Maribor | 2-0 | Birkirkara | 2-0 | ||
| q2l2 | Ludogorets | 3-0 | Slovan Bratislava | 4-2 | ||
