| ROUND | C | Q1 | Q2 | Q3 | Q4 | R1 | R2 | QF | SF | F | ||||||||||||
| l1 | l2 | l1 | l2 | l1 | l2 | l1 | l2 | r1 | r2 | r3 | r4 | r5 | r6 | l1 | l2 | l1 | l2 | l1 | l2 | |||
| Season archive |
| Tuesday, 31 July 2012 | ||||||
| q3l1 |  Motherwell | 0-2 | Panathinaikos | |||
| q3l1 |  Dynamo | 2-1 | Feyenoord | |||
| Wednesday, 1 August 2012 | ||||||
| q3l1 | Celtic | 2-1 | HJK | |||
| q3l1 |  Fenerbahçe | 1-1 | FC Vaslui | |||
| q3l1 |  FC København | 0-0 | Club Brugge | |||
| q3l1 | Anderlecht | 5-0 | Ekranas | |||
| q3l1 |  Molde | 0-1 | FC Basel | |||
| q3l1 |  Maribor | 4-1 | F91 Düdelingen | |||
| q3l1 |  Śląsk Wrocław | 0-3 | Helsingborg | |||
| q3l1 |  AEL | 1-0 | Partizan | |||
| q3l1 |  Sheriff | 0-1 | Dinamo Zagreb | |||
| q3l1 |  BATE | 1-1 | Debrecen | |||
| q3l1 |  Hapoel Ironi Kiryat Shmona | 4-0 | Neftçi | |||
| q3l1 | CFR Cluj | 1-0 | Slovan Liberec | |||
| Tuesday, 7 August 2012 | ||||||
| q3l2 | Feyenoord | 0-1 | Dynamo | 1-3 | ||
| q3l2 | Debrecen | 0-2 | BATE | 1-3 | ||
| Wednesday, 8 August 2012 | ||||||
| q3l2 | Club Brugge | 2-3 | FC København | 2-3 | ||
| q3l2 | Panathinaikos | 3-0 | Motherwell | 5-0 | ||
| q3l2 | HJK | 0-2 | Celtic | 1-4 | ||
| q3l2 | Dinamo Zagreb | 4-0 | Sheriff | 5-0 | ||
| q3l2 | Partizan | 0-1 | AEL | 0-2 | ||
| q3l2 | Helsingborg | 3-1 | Śląsk Wrocław | 6-1 | ||
| q3l2 | Slovan Liberec | 1-2 | CFR Cluj | 1-3 | ||
| q3l2 | FC Basel | 1-1 | Molde | 2-1 | ||
| q3l2 | Ekranas | 0-6 | Anderlecht | 0-11 | ||
| q3l2 | Neftçi | 2-2 | Hapoel Ironi Kiryat Shmona | 2-6 | ||
| q3l2 | F91 Düdelingen | 0-1 | Maribor | 1-5 | ||
| q3l2 | FC Vaslui | 1-4 | Fenerbahçe | 2-5 | ||
