| ROUND | R1 | R2 | R3 | R4 | R5 | R6 | QF | SF | F |
| Season archive |
| Tuesday, 25 September 2012 | ||||||
| r5 | Baltika | 1-2 | Zenit | |||
| 74 | Plopa | 13 | Hulk | |||
| 71 | Bruno Alves | |||||
| r5 | Spartak Nalchik | 1-3 | Akhmat | |||
| 50 | Siradze | 4 | Komorowski | |||
| 20 | N'Douassel | |||||
| 44 | Utsiev | |||||
| r5 | SKA-Khabarovsk | 2-1 | Amkar | aet | ||
| 16 | Arzumanyan | 82 | Ryabokobylenko | |||
| 102 | Lutsenko | |||||
| Wednesday, 26 September 2012 | ||||||
| r5 | Lokomotiv-Kazanka | 0-1 | Mordovia | |||
| 71 | Ivanov | |||||
| r5 | Volga Ulyanovsk | 0-1 | Kuban | |||
| 10 | Prudnikov | |||||
| r5 | Khimik Dzerzhinsk | 1-2 | FK Krasnodar | |||
| 70 | Makeev | 80 | Markov | |||
| 84 | Erokhin | |||||
| r5 | Khimki | 2-0 | Volga Nn | |||
| 61 | Komkov | |||||
| 84 | Romaschenko | |||||
| r5 | Astrakhan | 1-3 | Rostov | |||
| 42(p) | Sinyaev | 23 | Cociș | |||
| 63(p) | Kirichenko | |||||
| 72 | Cesnauskis | |||||
| r5 | Torpedo | 0-3 | Dinamo | |||
| 50 | Boyarintsev | 17 | Rykov | |||
| 32 | Rykov | |||||
| Abandoned after 51 minutes. Score awarded as 0-3. | ||||||
| r5 | Salyut Belgorod | 1-2 | Spartak | |||
| 22 | Mosquera | 33 | Ananidze | |||
| 53 | De Zeeuw | |||||
| r5 | Armavir | 0-3 | Lokomotiv | |||
| 38(p) | Sychev | |||||
| 64 | Caicedo | |||||
| 71 | Sychev | |||||
| r5 | Tom | 0-1 | CSKA | |||
| 42 | Cauņa | |||||
| r5 | Yenisey Krasnoyarsk | 2-1 | Rubin | |||
| 18 | Sitdikov | 90 | Davydov | |||
| 29 | Nikitin | |||||
| Thursday, 27 September 2012 | ||||||
| r5 | FC Orenburg | 2-4 | Krylia Sovetov | aet | ||
| 1 | Serdyukov | 61 | Vorobev | |||
| 49(p) | Budylin | 71 | Epureanu | |||
| 113 | Delkin | |||||
| 120 | Svezhov | |||||
| r5 | Ural | 0-0 | Anzhi | |||
| r5 | Tyumen | 2-1 | Alania | |||
| 3 | Pimenov | 70 | Mera | |||
| 28(p) | Zimarev | |||||
| 3 | Mukhammad SULTONOV (Lokomotiv-Kazanka, 2p) | |
| Aleksandr BOLONIN (Astrakhan) | ||
| Mikhail POPOV (Dinamo Stavropol) | ||
| +1 | Sergei BUDYLIN (FC Orenburg, 1p) | |
| Sergei SECHIN (Astrakhan, 1p) | ||
| +1 | Oleg MAKEEV (Khimik Dzerzhinsk) | |
| Dmitri AKHBA (Avangard, 1p) | ||
| Georgi GOGICHAEV (Spartak Vladikavkaz) |